CDS

Accession Number TCMCG057C37308
gbkey CDS
Protein Id XP_018434223.1
Location join(49986306..49986566,49986692..49986767,49986844..49986902,49986987..49987138,49987313..49987368,49987454..49987530,49987610..49987655,49987830..49987954,49988051..49988118,49988194..49988281,49988439..49988588)
Gene LOC108806573
GeneID 108806573
Organism Raphanus sativus

Protein

Length 385aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018578721.1
Definition PREDICTED: geranylgeranyl transferase type-1 subunit beta isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Prenyltransferase and squalene oxidase repeat
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
KEGG_ko ko:K11713        [VIEW IN KEGG]
EC 2.5.1.59        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004659        [VIEW IN EMBL-EBI]
GO:0004661        [VIEW IN EMBL-EBI]
GO:0004662        [VIEW IN EMBL-EBI]
GO:0004663        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005953        [VIEW IN EMBL-EBI]
GO:0005968        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0008318        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009788        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0018342        [VIEW IN EMBL-EBI]
GO:0018344        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0051769        [VIEW IN EMBL-EBI]
GO:0051771        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097354        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901420        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905958        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAGAGACCGCCGTGCACGGAGAAGCAATCGAGTGGGAGTCCGAAGACGAAGATTCCGATGACACAGAAGAAGAAGAAGAGTATACCTCGCCGTCGCAACCACCGTCTTCGGCGAACTTCGATAAAGATCGACACTTGGTGTATTTGCAGATGATGTACGAGCTGCTTCCGTACCATTACCAATCGCAGGAGATCAATCGACTTACCCTCGCTCACTTTATAATCTCCGGACTTCACTTTCTCGGCGCAACAGACCGTGTTGACAAAGATGTAGTTGCGAACTGGGTTCTGTCCTTCCAGGCCTTCCCTAGGAACAGAGCTTCACTCAAAGATGGTGAATTCTACGGTTTCTACGGTTCAAGGAGCTCTCAGTTTCCTTTAGATGTTAATGGGTCTGTGCTGCAGGATCTAACTCATAACAACAGTCACCTGGCAAGTACATACTGTGCCTTGGCTATTCTTAAGGTGATTGGGCATGATCTCTCGACCATCGACTCTCAATCACTGTTGTTATCCATGAATAATCTTCAACAAGATGATGGAAGCTTCATGCCTATCCATACTGGAGGCGAGACGGATCTTCGGTTTGTATATTGTGCTGCTGCAATCTCTGACATGCTGGGTGATTGGAGTGGAATGGACAAGGAGAAGGCTAAGAATTACATATTAAATTGTCAGTCATATGATGGTGGCTTTGGGTTGATCCCTGGTTCTGAATCTCATGGTGGTGGTACTTACTGTGCTATTGCATCCCTTAGATTGATGGGGTTTATTGGAGCTGATCTGCTGTCAAATGATCCATCCAGTTCAATTCTAGACCCTTCATTGCTTCTCAACTGGAGCCTACAGAGACAAGCCAGTGATGGTGGTTTTCAAGGTAGGACTAACAAACAGAGCGACACATGCTATGCATTTTGGATTGGAGCTGTCCTTAAACTCATAGGAGGCGATGCATTCATTGACAAAATTGCTCTCCGCCAATTTTTACTGAGCTGCCAGTCCAAGTATGGTGGGTTCAGTAAATTTCCTGGAGCGTTACCAGATCTGTATCATTCATACTATGGTTACACTGCGTTTAGCTTCTTGGAGGAACCGGGATTGAGTCCTCTATGCCCTGAGCTAGGGTTACCTCTTCTTACATCCTTGGGAATCTGA
Protein:  
MSETAVHGEAIEWESEDEDSDDTEEEEEYTSPSQPPSSANFDKDRHLVYLQMMYELLPYHYQSQEINRLTLAHFIISGLHFLGATDRVDKDVVANWVLSFQAFPRNRASLKDGEFYGFYGSRSSQFPLDVNGSVLQDLTHNNSHLASTYCALAILKVIGHDLSTIDSQSLLLSMNNLQQDDGSFMPIHTGGETDLRFVYCAAAISDMLGDWSGMDKEKAKNYILNCQSYDGGFGLIPGSESHGGGTYCAIASLRLMGFIGADLLSNDPSSSILDPSLLLNWSLQRQASDGGFQGRTNKQSDTCYAFWIGAVLKLIGGDAFIDKIALRQFLLSCQSKYGGFSKFPGALPDLYHSYYGYTAFSFLEEPGLSPLCPELGLPLLTSLGI